• UF Sparse Matrix Collection
  • Matrix group: vanHeukelum
  • Click here for a description of the vanHeukelum group.
  • Click here for a list of all matrices
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  • Matrix: vanHeukelum/cage9
  • Description: DNA electrophoresis, 9 monomers in polymer. A. van Heukelum, Utrecht U.
  • download as a MATLAB mat-file, file size: 108 KB. Use UFget(910) or UFget('vanHeukelum/cage9') in MATLAB.
  • download in Matrix Market format
  • download in Rutherford/Boeing format

    vanHeukelum/cage9

    vanHeukelum/cage9 graph

    Matrix properties
    number of rows3,534
    number of columns3,534
    nonzeros41,594
    structural full rank?yes
    structural rank3,534
    # of blocks from dmperm1
    # strongly connected comp.1
    entries not in dmperm blocks0
    explicit zero entries0
    nonzero pattern symmetrysymmetric
    numeric value symmetry 15%
    typereal
    structureunsymmetric
    Cholesky candidate?no
    positive definite?no

    authorA. van Heukelum
    editorT. Davis
    date2003
    kinddirected weighted graph
    2D/3D problem?no

    Ordering statistics:AMD METIS
    nnz(chol(P*(A+A'+s*I)*P'))568,980 354,526
    Cholesky flop count2.2e+08 7.1e+07
    nnz(L+U), no partial pivoting1,134,426 705,518
    nnz(V) for QR, upper bound nnz(L) for LU1,096,377 818,571
    nnz(R) for QR, upper bound nnz(U) for LU1,801,687 1,521,625

    Maintained by Tim Davis, last updated 04-May-2008.
    Matrix pictures by cspy, a MATLAB function in the CSparse package.
    Matrix graphs by Yifan Hu, AT&T Labs Visualization Group.