• UF Sparse Matrix Collection
  • Matrix group: GHS_indef
  • Click here for a description of the GHS_indef group.
  • Click here for a list of all matrices
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  • Matrix: GHS_indef/brainpc2
  • Description: Gould, Hu, & Scott: biological model (CUTEr)
  • download as a MATLAB mat-file, file size: 281 KB. Use UFget(1298) or UFget('GHS_indef/brainpc2') in MATLAB.
  • download in Matrix Market format
  • download in Rutherford/Boeing format

    GHS_indef/brainpc2

    dmperm of GHS_indef/brainpc2

    scc of GHS_indef/brainpc2

    GHS_indef/brainpc2 graph

    Matrix properties
    number of rows27,607
    number of columns27,607
    nonzeros179,395
    structural full rank?yes
    structural rank27,607
    # of blocks from dmperm2
    # strongly connected comp.2
    entries not in dmperm blocks0
    explicit zero entries0
    nonzero pattern symmetrysymmetric
    numeric value symmetrysymmetric
    typereal
    structuresymmetric
    Cholesky candidate?yes
    positive definite?no

    authorN. Duatrebande
    editorP. Toint
    date1994
    kindoptimization problem
    2D/3D problem?no

    Ordering statistics:AMD METIS DMPERM+
    nnz(chol(P*(A+A'+s*I)*P'))200,100 226,778 248,395
    Cholesky flop count1.5e+06 1.9e+06 2.2e+06
    nnz(L+U), no partial pivoting372,593 425,949 469,183
    nnz(V) for QR, upper bound nnz(L) for LU72,625,002 - 72,625,002
    nnz(R) for QR, upper bound nnz(U) for LU95,735,644 - 95,735,644

    Maintained by Tim Davis, last updated 04-May-2008.
    Matrix pictures by cspy, a MATLAB function in the CSparse package.
    Matrix graphs by Yifan Hu, AT&T Labs Visualization Group.